Beagle is distributed as a .jar file. The current version (4.1)
requires Java 8.
To run beagle 4.1, load the jre module and the beagle module
$ module load jre
$ module load beagle/4.1
and then run
$ java -jar $BEAGLE_HOME/beagle-4.1.jar
Running the jar without parameters will print a list of all the
